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Dissociation between hemodynamic and neurochemical responses during chemogenetic modulation of cortical circuits in rats

Preprint Created on 28 Jun 2026 bioRxiv

Introduction: Chemogenetic tools such as Designer Receptors Exclusively Activated by Designer Drugs (DREADDs) provide a powerful means to causally manipulate defined neuronal populations in vivo. While chemogenetic fMRI studies have consistently demonstrated robust hemodynamic responses following circuit perturbation, considerably less is known about the accompanying metabolic consequences. Functional magnetic resonance spectroscopy (fMRS) offers the potential to probe these neurochemical processes, yet the relationship between hemodynamic and metabolic responses remains poorly understood. Here, we combined chemogenetics, pharmacological fMRI (ph-fMRI), and proton magnetic resonance spectroscopy (1H-MRS/fMRS) at 7 T to investigate the temporal evolution of metabolic and hemodynamic responses in the rat motor cortex. Methods: Female Fischer rats received viral injections in the motor cortex to express either a pan-neuronal hM3D(Gq) DREADD construct (hSyn-hM3Dq) or an interneuron-targeted construct (hDlx-hM3Dq). Ph-fMRI, fMRS, and 1H-MRS measurements were performed before, during, and following systemic administration of clozapine-N-oxide (CNO, 1 mg/kg). Functional MRS was acquired during the acute response phase (60 min post-injection), while conventional 1H-MRS measurements were obtained at a delayed time point (70 min post-injection). Results: Chemogenetic modulation produced robust and opposing hemodynamic responses. Pan-neuronal activation elicited focal positive BOLD responses (+3.5 +/- 1.5%), whereas interneuron-targeted activation generated significant negative BOLD responses (-3.3 +/- 0.8%). In contrast, acute fMRS measurements revealed no significant changes in Glx or GABA concentrations during the first hour following CNO administration, despite the presence of strong hemodynamic effects. However, delayed metabolic alterations were detected 70 min after CNO administration. Animals expressing the pan-neuronal construct exhibited significant increases in GABA (+14.4%) and total choline compounds (+57.8%), whereas interneuron-targeted animals displayed reductions in several metabolites, including Glx (-15.6%), total NAA (-16.9%), glucose (-25.9%), and total creatine (-25.4%). Conclusion: Chemogenetic perturbation of cortical circuits produced robust hemodynamic responses but more subtle and temporally complex metabolic effects. The absence of detectable acute changes in Glx and GABA despite strong BOLD responses, together with the emergence of delayed neurochemical alterations, highlights the challenges of interpreting metabolic signals in relation to circuit activity.

Anvari-Vind, F., Just, N.

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